Links from this page to related variants, conditions, drugs and topics are not included for automated readers. Those connections are the Gene Knowledge Graph and are licensed as data: https://www.mygenelog.com/license

Variants linked to Epilepsy

Continuously updated · newest added Nov 11, 2026

20,983 positions on this site are linked to Epilepsy, out of 2,512,183 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Epilepsy

Sensitive

Cortical dysplasia-focal epilepsy syndrome

CNTNAP2 · rs139180845

See detailed info →
Standard

Epilepsy, progressive myoclonic, 1B

PRICKLE1 · rs141743294

See detailed info →
Standard

Epilepsy with myoclonic atonic seizures

SLC6A1 · rs747554856

See detailed info →
Standard

Familial sleep-related hypermotor epilepsy

CHRNA4 · rs1488210391

See detailed info →
Standard

Familial sleep-related hypermotor epilepsy

CHRNA4 · rs200200279

See detailed info →
Sensitive

Epilepsy, X-linked 1, with variable learning disabilities and behavior disorders

SYN1 · rs769458536

See detailed info →
Standard

Idiopathic generalized epilepsy

CACNA1H · rs60445853

See detailed info →
Standard

Familial infantile myoclonic epilepsy

TBC1D24 · rs575173753

See detailed info →
Sensitive

Microcephaly-intellectual disability-sensorineural hearing loss-epilepsy-abnormal muscle tone syndrome

AFG2A · rs765170329

See detailed info →
Sensitive

Generalized epilepsy-paroxysmal dyskinesia syndrome

KCNMA1 · rs143599540

See detailed info →
Standard

Pyridoxine-dependent epilepsy

ALDH7A1 · rs1554097854

See detailed info →
Standard

Developmental and epileptic encephalopathy

CACNA2D2 · rs150284749

See detailed info →
Standard

Idiopathic generalized epilepsy

CACNA1H · rs766694151

See detailed info →
Sensitive

Generalized epilepsy-paroxysmal dyskinesia syndrome

KCNMA1 · rs75843969

See detailed info →
Standard

Epilepsy with myoclonic atonic seizures

SLC6A1 · rs1697597168

See detailed info →
Standard

EPILEPSY, CHILDHOOD ABSENCE, SUSCEPTIBILITY TO, 2

GABRG2 · rs1445637165

See detailed info →
Standard

Progressive myoclonic epilepsy type 3

CLN3 · rs137906617

See detailed info →
Standard

Epilepsy, familial focal, with variable foci 3

NPRL3 · rs200041907

See detailed info →
Standard

Pyridoxine-dependent epilepsy

ALDH7A1 · rs543181020

See detailed info →
Standard

Epilepsy

CAMTA1 · rs143630062

See detailed info →

Showing 20 of 20983 · page 1048 of 1050

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.