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Variants linked to Epilepsy

Continuously updated · newest added Nov 11, 2026

20,983 positions on this site are linked to Epilepsy, out of 2,512,277 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Epilepsy

Standard

Idiopathic generalized epilepsy

CACNA1H · rs57315342

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Standard

Autosomal dominant epilepsy with auditory features

LGI1 · rs201376381

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Sensitive

Intellectual disability-epilepsy-extrapyramidal syndrome

DEAF1 · rs767318857

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Standard

Autosomal dominant nocturnal frontal lobe epilepsy 5

KCNT1 · rs141281093

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Standard

Polyhydramnios, megalencephaly, and symptomatic epilepsy

STRADA · rs56163554

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Standard

Familial infantile myoclonic epilepsy

TBC1D24 · rs766745103

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Standard

Familial temporal lobe epilepsy 7

RELN · rs113998363

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Standard

Epilepsy, familial temporal lobe, 1

LGI1 · rs151104648

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Sensitive

Cortical dysplasia-focal epilepsy syndrome

CNTNAP2 · rs142331907

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Standard

Severe myoclonic epilepsy in infancy

SCN1A · rs121917910

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Standard

Autosomal dominant nocturnal frontal lobe epilepsy 5

KCNT1 · rs2491078631

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Standard

Autosomal dominant nocturnal frontal lobe epilepsy 3

CHRNB2 · rs199999862

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Standard

Idiopathic generalized epilepsy

CACNA1H · rs372132309

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Standard

Idiopathic generalized epilepsy

CACNA1H · rs548407874

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Standard

Progressive myoclonic epilepsy type 7

KCNC1 · rs1176314990

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Standard

Idiopathic generalized epilepsy

ADGRV1 · rs200789563

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Standard

Familial sleep-related hypermotor epilepsy

CHRNA4 · rs771468419

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Standard

Autosomal dominant nocturnal frontal lobe epilepsy 5

KCNT1 · rs1285595185

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Standard

Epilepsy, idiopathic generalized, susceptibility to, 13

GABRA1 · rs541335259

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Standard

Juvenile myoclonic epilepsy

EFHC1 · rs371151471

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Showing 20 of 20983 · page 1044 of 1050

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.