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Variants linked to Epilepsy

Continuously updated · newest added Nov 11, 2026

20,983 positions on this site are linked to Epilepsy, out of 2,512,277 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Epilepsy

Standard

Epilepsy, familial temporal lobe, 1

LGI1 · rs202148793

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Standard

Progressive myoclonic epilepsy type 3

KCTD7 · rs372150992

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Standard

Progressive myoclonic epilepsy

EPM2A · rs547147183

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Sensitive

Generalized epilepsy-paroxysmal dyskinesia syndrome

KCNMA1 · rs2229008

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Standard

Myoclonic epilepsy, progressive, X-linked

PRICKLE2 · rs139747674

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Standard

Progressive myoclonic epilepsy type 3

KCTD7 · rs753658170

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Sensitive

Cortical dysplasia-focal epilepsy syndrome

CNTNAP2 · rs77025884

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Standard

Epilepsy

TBC1D24 · rs375873110

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Standard

Autosomal dominant epilepsy with auditory features

LGI1 · rs781404129

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Standard

Epilepsy, familial focal, with variable foci 3

NPRL3 · rs368936546

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Standard

Autosomal dominant nocturnal frontal lobe epilepsy 5

KCNT1 · rs1172086515

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Standard

Epilepsy with myoclonic atonic seizures

SLC6A1 · rs2124912568

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Sensitive

Epilepsy, X-linked 1, with variable learning disabilities and behavior disorders

SYN1 · rs794726957

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Standard

Progressive myoclonic epilepsy type 7

KCNC1 · rs755628813

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Sensitive

Intellectual developmental disorder with or without epilepsy or cerebellar ataxia

RORA · rs2542052131

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Standard

Epilepsy, familial focal, with variable foci 3

NPRL3 · rs746082270

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Standard

Developmental and epileptic encephalopathy

KCNQ2 · rs1555871853

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Standard

Idiopathic generalized epilepsy

GABRD · rs200605909

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Standard

Epilepsy, familial focal, with variable foci 3

NPRL3 · rs751307143

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Standard

Epilepsy

PIGQ · rs150887807

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.