Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 9, 2026

1,540 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,507,836 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

HDL cholesterol

SIK3 · rs7115583

See detailed info → Standard

Total cholesterol levels

near REPS1 · rs6923534

See detailed info → Standard

High density lipoprotein cholesterol levels

LINC01169 · rs2469128

See detailed info → Standard

High density lipoprotein cholesterol levels

TSHR-AS1 · rs2371562

See detailed info → Standard

Total cholesterol levels

near NAB1 · rs1155061

See detailed info → Standard

High density lipoprotein cholesterol levels

CTBP2 · rs10901854

See detailed info → Standard

HDL cholesterol

PID1 · rs985891

See detailed info → Standard

LDL cholesterol

CREB3L1 · rs73461870

See detailed info → Standard

Low density lipoprotein cholesterol levels

ONECUT1 · rs62023490

See detailed info → Standard

High density lipoprotein cholesterol levels

near ATP5PDP3 · rs543458

See detailed info → Standard

HDL cholesterol

MIR670HG · rs2625390

See detailed info → Standard

High density lipoprotein cholesterol levels

HLA-F-AS1 · rs1611282

See detailed info → Standard

HDL cholesterol

GTF2I-AS1 · rs113544043

See detailed info → Standard

High density lipoprotein cholesterol levels

near LCORL · rs7694606

See detailed info → Standard

HDL cholesterol

COPB1 · rs7121538

See detailed info → Standard

HDL cholesterol

ID1 · rs6120815

See detailed info → Standard

HDL cholesterol

DMGDH · rs57444763

See detailed info → Standard

Total cholesterol levels

PDE4A · rs556765076

See detailed info → Standard

High density lipoprotein cholesterol levels

DENND1A · rs4620350

See detailed info → Standard

HDL cholesterol

ITPR3 · rs2274197

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.