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Who was studied 20,791 European ancestry cases, 286,893 European ancestry controls; replicated in 251,963 European ancestry cases, 2,271,667 European ancestry controls.
The effect
The reported allele is T; the catalogue records no effect size
; p = 4 × 10−23.
Where it sits Chromosome 3, band 3q25.31 — in an intron of TIPARP-AS1.
What each result means
C/CNo copy of the version the research linked to Basal cell carcinoma (MTAG). This is the starting point the study compared everyone against.
C/TOne copy of the version the research linked to Basal cell carcinoma (MTAG). That is a smaller link than two copies.
T/TTwo copies of the version the research linked to Basal cell carcinoma (MTAG). That is the strongest link of the three results. A link in a study is not a diagnosis.
Nature communications · 2022 · PMID 36496446 · open access
Questions about rs9878566
What is rs9878566?
rs9878566 is a single position in the genome, in or near the TIPARP-AS1 gene. Published research associates it with basal cell carcinoma (mtag). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
What conditions is rs9878566 linked to?
On MyGeneLog this position is linked to Basal Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.
Does having rs9878566 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs9878566 come from?
GWAS Catalog, Nature communications 2022, PMID:36496446. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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