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Osteoporosis NOS (PheCode 743.11)

near MRPS31P1 · rs87939

Where this position leads

Condition: Osteoporosis

rs87939 Condition: Osteoporosis Osteoporosis Condition rs87939 rs87939 near MRPS31P1

What the study found

Who was studied 2,462 African American or Afro-Caribbean cases, 117,887 African American or Afro-Caribbean controls, 19,795 European ancestry cases, 422,914 European ancestry controls, 1,558 Hispanic or Latin American cases, 57,551 Hispanic or Latin American controls.

The effect Each copy of the G allele shifted the measure 0.0763 higher (95% confidence interval 0.055-0.098); p = 1 × 10−13.

How common The G allele had a frequency of about 53% in the people studied.

Where it sits Chromosome 3, band 3p22.1 — between genes, 92.7 kb from MRPS31P1.

What each result means

A/A No copy of the version the research linked to Osteoporosis NOS (PheCode 743.11). This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Osteoporosis NOS (PheCode 743.11). That is a smaller link than two copies.
G/G Two copies of the version the research linked to Osteoporosis NOS (PheCode 743.11). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source
Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program
Verma A, Huffman JE, Rodriguez A, Conery M, Liu M, Ho YL, Kim Y, Heise DA, Guare L, Panickan VA, Garcon H, Linares F
and 59 more — show all
Costa L, Goethert I, Tipton R, Honerlaw J, Davies L, Whitbourne S, Cohen J, Posner DC, Sangar R, Murray M, Wang X, Dochtermann DR, Devineni P, Shi Y, Nandi TN, Assimes TL, Brunette CA, Carroll RJ, Clifford R, Duvall S, Gelernter J, Hung A, Iyengar SK, Joseph J, Kember R, Kranzler H, Kripke CM, Levey D, Luoh SW, Merritt VC, Overstreet C, Deak JD, Grant SFA, Polimanti R, Roussos P, Shakt G, Sun YV, Tsao N, Venkatesh S, Voloudakis G, Justice A, Begoli E, Ramoni R, Tourassi G, Pyarajan S, Tsao P, O'Donnell CJ, Muralidhar S, Moser J, Casas JP, Bick AG, Zhou W, Cai T, Voight BF, Cho K, Gaziano JM, Madduri RK, Damrauer S, Liao KP
Science (New York, N.Y.) · 2024 · PMID 39024449 · open access

Questions about rs87939

What is rs87939?

rs87939 is a single position in the genome, in or near the near MRPS31P1 gene. Published research associates it with osteoporosis nos (phecode 743.11). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs87939 linked to?

On MyGeneLog this position is linked to Osteoporosis. The research behind each link, and its sources, are set out on that condition page.

Does having rs87939 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs87939 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Osteoporosis NOS (PheCode 743.11) (rs87939). MyGeneLog™. https://www.mygenelog.com/variants/rs87939

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