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MEP1B protein levels

near GAREM1 · rs80227146

Where this position leads

Condition: Celiac Disease

rs80227146 Condition: Celiac Disease Celiac Disease Condition rs80227146 rs80227146 near GAREM1

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−91, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.327 lower (95% confidence interval 0.29-0.37); p = 2 × 10−91.

How common The G allele had a frequency of about 2% in the people studied.

Where it sits Chromosome 18, band 18q12.1 — between genes, 14.1 kb from GAREM1.

How common each version is

AG
World gnomAD
A 99.1% · G 0.9%
World 1000 Genomes
A 99.6% · G 0.4%
World TOPMed
A 99.2% · G 0.9%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. No Korean figure for this position yet.

What each result means

A/A No copy of the version the research linked to MEP1B protein levels. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to MEP1B protein levels. That is a smaller link than two copies.
G/G Two copies of the version the research linked to MEP1B protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs80227146

What is rs80227146?

rs80227146 is a single position in the genome, in or near the near GAREM1 gene. Published research associates it with mep1b protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs80227146 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs80227146 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs80227146 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

MEP1B protein levels (rs80227146). MyGeneLog™. https://www.mygenelog.com/variants/rs80227146

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