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Standard

Monocyte count

near SESN3 · rs75963851

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−45, with 10 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 88,929 East Asian ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0757 SD units higher (95% confidence interval 0.058-0.094); p = 3 × 10−16.

How common The A allele had a frequency of about 93% in the people studied.

Where it sits Chromosome 11, band 11q21 — between genes, 53.3 kb from LNCRNA-IUR.

How common each version is

AG
Korean KRGDB
A 94.5% · G 5.5%
Korean Korea4K
A 95.2% · G 4.8%
Korean Korea1K
A 95.5% · G 4.5%
Japanese ToMMo
A 92.4% · G 7.6%
Vietnamese
A 93.1% · G 6.9%
World gnomAD
A 99.6% · G 0.4%
World 1000 Genomes
A 98.5% · G 1.5%
World TOPMed
A 99.6% · G 0.4%

By ancestry gnomAD

East Asian
A 95.2% · G 4.8%
European (non-Finnish)
A 99.9%
African / African American
A 99.6%
South Asian
A 98.6% · G 1.4%
Admixed American (Latino)
A 99.8%
Ashkenazi Jewish
A 99.3% · G 0.7%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

A/A Two copies of the version the research linked to Monocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Monocyte count. That is a smaller link than two copies.
G/G No copy of the version the research linked to Monocyte count. This is the starting point the study compared everyone against.
Source

Quoting this page

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Monocyte count (rs75963851). MyGeneLog™. https://www.mygenelog.com/variants/rs75963851

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