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Corneal resistance factor (MTAG)

near TCF4 · rs75828199

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−28, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 123,734 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.135 lower (95% confidence interval 0.11-0.16); p = 2 × 10−28.

How common The A allele had a frequency of about 3% in the people studied.

Where it sits Chromosome 18, band 18q21.2 — between genes, 14.7 kb from TCF4.

What each result means

A/A Two copies of the version the research linked to Corneal resistance factor (MTAG). That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Corneal resistance factor (MTAG). That is a smaller link than two copies.
C/C No copy of the version the research linked to Corneal resistance factor (MTAG). This is the starting point the study compared everyone against.
Source

Questions about rs75828199

What is rs75828199?

rs75828199 is a single position in the genome, in or near the near TCF4 gene. Published research associates it with corneal resistance factor (mtag). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs75828199 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs75828199 come from?

GWAS Catalog, JAMA ophthalmology 2022, PMID:35446358. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Corneal resistance factor (MTAG) (rs75828199). MyGeneLog™. https://www.mygenelog.com/variants/rs75828199

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