Standard

Homocysteine levels

CPS1 · rs7422339

Where this position leads

Condition: Homocysteine Levels

rs7422339 Condition: Homocysteine Levels Homocysteine Levels Condition rs7422339 rs7422339 CPS1

What the study found

Who was studied 1,786 Filipino ancestry female individuals; replicated in 1,679 Filipino ancestry offspring.

The effect Each copy of the A allele shifted the measure 0.05 log(Hcy) higher (95% confidence interval 0.03-0.07); p = 5 × 10−9.

How common The A allele had a frequency of about 24% in the people studied.

Where it sits Chromosome 2, band 2q34 — a missense change in CPS1.

What each result means

A/A Two copies of the version the research linked to Homocysteine levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Homocysteine levels. That is a smaller link than two copies.
C/C No copy of the version the research linked to Homocysteine levels. This is the starting point the study compared everyone against.
Source

Questions about rs7422339

What is rs7422339?

rs7422339 is a single position in the genome, in or near the CPS1 gene. Published research associates it with homocysteine levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs7422339 linked to?

On MyGeneLog this position is linked to Homocysteine Levels. The research behind each link, and its sources, are set out on that condition page.

Does having rs7422339 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs7422339 come from?

GWAS Catalog, Hum Mol Genet 2010, PMID:20154341. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Homocysteine levels (rs7422339). MyGeneLog™. https://www.mygenelog.com/variants/rs7422339

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