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Stands on its own.
Nothing else here links to this position yet — but the page above is the point: what the
research found, what each genotype means, and where it came from, in language you can
read. Links to conditions, drugs and the senses appear automatically if we write them.
What the study found
Who was studied 112,866 European ancestry individuals.
The effect
Each copy of the A allele shifted the measure 0.03 higher (95% confidence interval 0.02-0.04); p = 9 × 10−10.
How common The A allele had a frequency of about 22% in the people studied.
Where it sits Chromosome 17, band 17q21.32 — in an intron of SKAP1.
What each result means
A/ATwo copies of the version the research linked to Ease of getting up in the morning. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/GOne copy of the version the research linked to Ease of getting up in the morning. That is a smaller link than two copies.
G/GNo copy of the version the research linked to Ease of getting up in the morning. This is the starting point the study compared everyone against.
Nature genetics · 2017 · PMID 28604731 · open access
Questions about rs72827839
What is rs72827839?
rs72827839 is a single position in the genome, in or near the SKAP1 gene. Published research associates it with ease of getting up in the morning. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
Does having rs72827839 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs72827839 come from?
GWAS Catalog, Nat Genet 2017, PMID:28604731. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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Quoting this page
Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.
Ease of getting up in the morning (rs72827839). MyGeneLog™. https://www.mygenelog.com/variants/rs72827839