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Standard

Concentration of very large HDL particles

BANP · rs7184826

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−18, with 15 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the T allele shifted the measure 0.01 mmol/L lower (95% confidence interval 0.01-0.01); p = 9 × 10−12.

Where it sits Chromosome 16, band 16q24.2 — in an intron of BANP.

How common each version is

GT
Korean KRGDB
G 95.5% · T 4.5%
Korean Korea4K
G 96.1% · T 3.9%
Korean Korea1K
G 96.2% · T 3.8%
Japanese ToMMo
G 93.1% · T 6.9%
Vietnamese
G 98.1% · T 1.9%
World gnomAD
G 59.4% · T 40.6%
World 1000 Genomes
G 72.8% · T 27.2%
World TOPMed
G 58.8% · T 41.2%

By ancestry gnomAD

East Asian
G 95.4% · T 4.6%
European (non-Finnish)
G 53.3% · T 46.7%
African / African American
G 56.7% · T 43.3%
South Asian
G 86.0% · T 14.0%
Admixed American (Latino)
G 66.4% · T 33.6%
Middle Eastern
G 67.3% · T 32.6%
Finnish
G 69.8% · T 30.2%
Ashkenazi Jewish
G 57.7% · T 42.3%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

G/G No copy of the version the research linked to Concentration of very large HDL particles. This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Concentration of very large HDL particles. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Concentration of very large HDL particles. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Concentration of very large HDL particles (rs7184826). MyGeneLog™. https://www.mygenelog.com/variants/rs7184826

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