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Standard

Triglycerides in very large HDL

near RSPO3 · rs6916318

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 11 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the T allele shifted the measure 0.01 mmol/L lower (95% confidence interval 0.01-0.01); p = 3 × 10−14.

Where it sits Chromosome 6, band 6q22.33 — between genes, 4.7 kb from RSPO3.

How common each version is

AT
Korean KRGDB
A 48.0% · T 52.0%
Korean Korea4K
A 48.9% · T 51.1%
Japanese ToMMo
A 50.4% · T 49.6%
Vietnamese
A 50.0% · T 50.0%
World gnomAD
A 47.3% · T 52.7%
World 1000 Genomes
A 49.0% · T 51.0%
World TOPMed
A 47.2% · T 52.8%

By ancestry gnomAD

East Asian
A 47.9% · T 52.1%
European (non-Finnish)
A 47.8% · T 52.2%
African / African American
A 42.6% · T 57.4%
South Asian
A 50.4% · T 49.6%
Admixed American (Latino)
A 51.7% · T 48.3%
Middle Eastern
A 61.3% · T 38.7%
Finnish
A 52.0% · T 48.0%
Ashkenazi Jewish
A 55.4% · T 44.6%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

A/A No copy of the version the research linked to Triglycerides in very large HDL. This is the starting point the study compared everyone against.
A/T One copy of the version the research linked to Triglycerides in very large HDL. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Triglycerides in very large HDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Triglycerides in very large HDL (rs6916318). MyGeneLog™. https://www.mygenelog.com/variants/rs6916318

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