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Standard

Omega-6 fatty acid levels

SIK3 · rs688456

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−73, with 37 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 239,268 European ancestry individuals.

The effect The reported allele is T; the catalogue records no effect size ; p = 5 × 10−74.

Where it sits Chromosome 11, band 11q23.3 — in an intron of SIK3.

How common each version is

GT
Korean KRGDB
G 80.1% · T 19.9%
Korean Korea4K
G 78.9% · T 21.1%
Korean Korea1K
G 78.7% · T 21.3%
Japanese ToMMo
G 81.0% · T 18.9%
Vietnamese
G 83.0% · T 17.0%
World gnomAD
G 68.1% · T 31.9%
World 1000 Genomes
G 65.3% · T 34.7%
World TOPMed
G 66.8% · T 33.2%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

G/G No copy of the version the research linked to Omega-6 fatty acid levels. This is the starting point the study compared everyone against.
G/T One copy of the version the research linked to Omega-6 fatty acid levels. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Omega-6 fatty acid levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Omega-6 fatty acid levels (rs688456). MyGeneLog™. https://www.mygenelog.com/variants/rs688456

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