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Standard

Serum urate levels

CHD9 · rs67499551

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−8, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 219,768 East Asian ancestry individuals, 677,373 European ancestry individuals, 132,182 individuals.

The effect Each copy of the A allele shifted the measure 0.014 higher (95% confidence interval 0.0093-0.0187); p = 8 × 10−9.

Where it sits Chromosome 16, band 16q12.2 — in an intron of CHD9.

How common each version is

AT
Korean KRGDB
A 20.5% · T 79.5%
Korean Korea4K
A 22.1% · T 77.9%
Korean Korea1K
A 21.8% · T 78.2%
Japanese ToMMo
A 18.7% · T 81.3%
Vietnamese
A 24.8% · T 75.2%
World gnomAD
A 28.4% · T 71.6%
World 1000 Genomes
A 25.7% · T 74.3%
World TOPMed
A 27.5% · T 72.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Serum urate levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/T One copy of the version the research linked to Serum urate levels. That is a smaller link than two copies.
T/T No copy of the version the research linked to Serum urate levels. This is the starting point the study compared everyone against.
Source

Quoting this page

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Serum urate levels (rs67499551). MyGeneLog™. https://www.mygenelog.com/variants/rs67499551

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