Sensitive

Multiple sclerosis

IL20RA · rs62420820

Where this position leads

Condition: Multiple Sclerosis

rs62420820 Condition: Multiple Sclerosis Multiple Sclerosis Condition rs62420820 rs62420820 IL20RA

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−35, with 5 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 14,802 European and unknown ancestry cases, 26,703 European and unknown ancestry controls; replicated in 32,627 European and unknown ancestry cases, 41,672 European and unknown ancestry controls.

The effect Each copy of the A allele carried 1.14 times the odds of Multiple sclerosis; p = 9 × 10−36.

Where it sits Chromosome 6, band 6q23.3 — between genes, 26.9 kb from IL22RA2.

How common each version is

AG
Korean KRGDB
A 7.8% · G 92.2%
Korean Korea4K
A 8.2% · G 91.8%
Korean Korea1K
A 8.6% · G 91.4%
Japanese ToMMo
A 9.7% · G 90.3%
World gnomAD
A 19.7% · G 80.3%
World 1000 Genomes
A 15.9% · G 84.1%
World TOPMed
A 19.5% · G 80.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Multiple sclerosis. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Multiple sclerosis. That is a smaller link than two copies.
G/G No copy of the version the research linked to Multiple sclerosis. This is the starting point the study compared everyone against.
Source

Questions about rs62420820

What is rs62420820?

rs62420820 is a single position in the genome, in or near the IL20RA gene. Published research associates it with multiple sclerosis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs62420820 linked to?

On MyGeneLog this position is linked to Multiple Sclerosis. The research behind each link, and its sources, are set out on that condition page.

Does having rs62420820 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs62420820 come from?

GWAS Catalog, Science 2019, PMID:31604244. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Multiple sclerosis (rs62420820). MyGeneLog™. https://www.mygenelog.com/variants/rs62420820

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