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Standard

Height

near HCN1 · rs62369904

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−7, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 360,388 European ancestry individuals, 165,056 East Asian ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.0114 higher (95% confidence interval 0.0073-0.0155); p = 4 × 10−8.

Where it sits Chromosome 5, band 5p12 — between genes, 162.1 kb from HCN1.

How common each version is

AT
Korean KRGDB
A 90.3% · T 9.7%
Korean Korea4K
A 90.7% · T 9.3%
Korean Korea1K
A 90.8% · T 9.2%
Japanese ToMMo
A 92.7% · T 7.3%
Vietnamese
A 91.7% · T 8.3%
World gnomAD
A 83.0% · T 17.0%
World 1000 Genomes
A 85.8% · T 14.2%
World TOPMed
A 83.1% · T 16.9%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A No copy of the version the research linked to Height. This is the starting point the study compared everyone against.
A/T One copy of the version the research linked to Height. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Height. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Height (rs62369904). MyGeneLog™. https://www.mygenelog.com/variants/rs62369904

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