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Standard

Lymphocyte count

IL7R · rs62355272

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−43, with 3 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 171,643 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0568 higher (95% confidence interval 0.049-0.065); p = 2 × 10−43.

How common The A allele had a frequency of about 26% in the people studied.

Where it sits Chromosome 5, band 5p13.2 — between genes, 2.9 kb from IL7R.

How common each version is

AC
Korean KRGDB
A 2.3% · C 97.7%
Korean Korea4K
A 2.1% · C 97.9%
Japanese ToMMo
A 6.8% · C 93.2%
World gnomAD
A 26.2% · C 73.8%
World 1000 Genomes
A 20.2% · C 79.8%
World TOPMed
A 25.9% · C 74.1%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Lymphocyte count. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Lymphocyte count. That is a smaller link than two copies.
C/C No copy of the version the research linked to Lymphocyte count. This is the starting point the study compared everyone against.
Source

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Lymphocyte count (rs62355272). MyGeneLog™. https://www.mygenelog.com/variants/rs62355272

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