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Myeloproliferative neoplasms

TET2 · rs62329718

Where this position leads

Condition: Myeloproliferative Neoplasms

rs62329718 Condition: Myeloproliferative Neoplasms Myeloproliferative Neoplasms Condition rs62329718 rs62329718 TET2

What the study found

Who was studied 1,086 British ancestry cases, 407,155 British ancestry controls, 640 Finnish ancestry cases, 176,259 Finnish ancestry controls.

The effect The reported allele is A; the catalogue records no effect size ; p = 7 × 10−27.

How common The A allele had a frequency of about 4% in the people studied.

Where it sits Chromosome 4, band 4q24 — between genes, 49.2 kb from RPL6P14.

What each result means

A/A Two copies of the version the research linked to Myeloproliferative neoplasms. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/T One copy of the version the research linked to Myeloproliferative neoplasms. That is a smaller link than two copies.
T/T No copy of the version the research linked to Myeloproliferative neoplasms. This is the starting point the study compared everyone against.
Source

Questions about rs62329718

What is rs62329718?

rs62329718 is a single position in the genome, in or near the TET2 gene. Published research associates it with myeloproliferative neoplasms. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs62329718 linked to?

On MyGeneLog this position is linked to Myeloproliferative Neoplasms. The research behind each link, and its sources, are set out on that condition page.

Does having rs62329718 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs62329718 come from?

GWAS Catalog, Nature 2020, PMID:33057200. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Myeloproliferative neoplasms (rs62329718). MyGeneLog™. https://www.mygenelog.com/variants/rs62329718

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