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Vitamin D deficiency

HS1BP3 · rs62122090

Where this position leads

Condition: Vitamin D Deficiency and the GC Gene

rs62122090 Condition: Vitamin D Deficiency and the GC Gene Vitamin D Deficiency and the GC Gene Condition rs62122090 rs62122090 HS1BP3

What the study found

Who was studied 3,598 Qatari ancestry cases, 2,287 Qatari ancestry controls; replicated in 4,641 Qatari ancestry cases, 3,126 Qatari ancestry controls.

The effect The reported allele is T; the catalogue records no effect size ; p = 2 × 10−12.

How common The T allele had a frequency of about 8% in the people studied.

Where it sits Chromosome 2, band 2p24.1 — in an intron of HS1BP3.

What each result means

C/C No copy of the version the research linked to Vitamin D deficiency. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Vitamin D deficiency. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Vitamin D deficiency. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs62122090

What is rs62122090?

rs62122090 is a single position in the genome, in or near the HS1BP3 gene. Published research associates it with vitamin d deficiency. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs62122090 linked to?

On MyGeneLog this position is linked to Vitamin D Deficiency and the GC Gene. The research behind each link, and its sources, are set out on that condition page.

Does having rs62122090 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs62122090 come from?

GWAS Catalog, International journal of molecular sciences 2025, PMID:41096749. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Vitamin D deficiency (rs62122090). MyGeneLog™. https://www.mygenelog.com/variants/rs62122090

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