Links from this page to related variants, conditions, drugs and topics are not included for automated readers. Those connections are the Gene Knowledge Graph and are licensed as data: https://www.mygenelog.com/license

Standard

Average diameter for VLDL particles

near BCL2L11 · rs61484463

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−10, with 3 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the C allele shifted the measure 0.03 nm lower (95% confidence interval 0.03-0.03); p = 5 × 10−11.

Where it sits Chromosome 2, band 2q13 — in an intron of MIR4435-2HG.

How common each version is

CT
Korean KRGDB
C 12.0% · T 87.9%
Korean Korea4K
C 12.8% · T 87.2%
Korean Korea1K
C 12.2% · T 87.8%
Japanese ToMMo
C 17.2% · T 82.8%
Vietnamese
C 6.0% · T 94.0%
World gnomAD
C 7.8% · T 92.2%
World 1000 Genomes
C 9.5% · T 90.5%
World TOPMed
C 8.3% · T 91.7%

By ancestry gnomAD

East Asian
C 12.7% · T 87.3%
European (non-Finnish)
C 5.3% · T 94.7%
African / African American
C 12.6% · T 87.4%
South Asian
C 6.9% · T 93.1%
Admixed American (Latino)
C 8.5% · T 91.5%
Middle Eastern
C 5.1% · T 94.9%
Finnish
C 4.0% · T 96.0%
Ashkenazi Jewish
C 2.6% · T 97.4%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

C/C Two copies of the version the research linked to Average diameter for VLDL particles. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Average diameter for VLDL particles. That is a smaller link than two copies.
T/T No copy of the version the research linked to Average diameter for VLDL particles. This is the starting point the study compared everyone against.
Source

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Average diameter for VLDL particles (rs61484463). MyGeneLog™. https://www.mygenelog.com/variants/rs61484463

← See all variants