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Lifetime smoking index

NOL4L · rs6119897

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 462,690 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.018 lower (95% confidence interval 0.014-0.022); p = 4 × 10−15.

How common The G allele had a frequency of about 76% in the people studied.

Where it sits Chromosome 20, band 20q11.21 — in an intron of NOL4L.

How common each version is

AG
Korean KRGDB
A 82.8% · G 17.2%
Korean Korea4K
A 83.9% · G 16.1%
Korean Korea1K
A 84.1% · G 15.9%
Japanese ToMMo
A 85.8% · G 14.2%
Vietnamese
A 71.8% · G 28.2%
World gnomAD
A 27.5% · G 72.5%
World 1000 Genomes
A 37.0% · G 63.0%
World TOPMed
A 28.1% · G 71.9%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A No copy of the version the research linked to Lifetime smoking index. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Lifetime smoking index. That is a smaller link than two copies.
G/G Two copies of the version the research linked to Lifetime smoking index. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs6119897

What is rs6119897?

rs6119897 is a single position in the genome, in or near the NOL4L gene. Published research associates it with lifetime smoking index. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs6119897 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs6119897 come from?

GWAS Catalog, Psychological medicine 2020, PMID:31689377. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Lifetime smoking index (rs6119897). MyGeneLog™. https://www.mygenelog.com/variants/rs6119897

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