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Primary sclerosing cholangitis

PRKD2 · rs60652743

Stands on its own. Nothing else here links to this position yet — but the page above is the point: what the research found, what each genotype means, and where it came from, in language you can read. Links to conditions, drugs and the senses appear automatically if we write them.

What each result means

A/A Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Primary sclerosing cholangitis compared to the general population. (GWAS Catalog, Nat Genet 2016, PMID:27992413)

A/G Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Primary sclerosing cholangitis. (GWAS Catalog, Nat Genet 2016, PMID:27992413)

G/G Published research associates this genotype with typical/baseline likelihood of Primary sclerosing cholangitis — no copies of the reported risk allele. (GWAS Catalog, Nat Genet 2016, PMID:27992413)

Source: GWAS Catalog, Nat Genet 2016, PMID:27992413

Questions about rs60652743

What is rs60652743?

rs60652743 is a single position in the genome, in or near the PRKD2 gene. Published research associates it with primary sclerosing cholangitis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs60652743 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs60652743 come from?

GWAS Catalog, Nat Genet 2016, PMID:27992413. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

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