Sensitive

Basal cell carcinoma

near KRT6A · rs599466

Where this position leads

Condition: Basal Cell Carcinoma

rs599466 Condition: Basal Cell Carcinoma Basal Cell Carcinoma Condition rs599466 rs599466 near KRT6A

What the study found

Who was studied 49,905 European ancestry cases, 752,392 European ancestry controls.

The effect Each copy of the G allele shifted the measure 0.0787 lower (95% confidence interval 0.063-0.094); p = 7 × 10−23.

Where it sits Chromosome 12, band 12q13.13 — between genes, 8.3 kb from KRT6A.

What each result means

A/A No copy of the version the research linked to Basal cell carcinoma. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Basal cell carcinoma. That is a smaller link than two copies.
G/G Two copies of the version the research linked to Basal cell carcinoma. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs599466

What is rs599466?

rs599466 is a single position in the genome, in or near the near KRT6A gene. Published research associates it with basal cell carcinoma. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs599466 linked to?

On MyGeneLog this position is linked to Basal Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs599466 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs599466 come from?

GWAS Catalog, Communications biology 2024, PMID:38182794. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Basal cell carcinoma (rs599466). MyGeneLog™. https://www.mygenelog.com/variants/rs599466

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