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Intraocular pressure

TRAF3IP1 · rs57435966

Where this position leads

What the study found

Who was studied 139,555 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.132 higher (95% confidence interval 0.087-0.177); p = 6 × 10⁻⁹.

How common The C allele had a frequency of about 91% in the people studied.

Where it sits Chromosome 2, band 2q37.3 — between genes, 0.6 kb from TRAF3IP1.

What each result means

C/C Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Intraocular pressure compared to the general population.

C/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Intraocular pressure.

T/T Published research associates this genotype with typical/baseline likelihood of Intraocular pressure — no copies of the reported risk allele.

Source

Genome-wide analyses identify 68 new loci associated with intraocular pressure and improve risk prediction for primary open-angle glaucoma

Khawaja AP, Cooke Bailey JN, Wareham NJ, Scott RA, Simcoe M, Igo RP Jr, Song YE, Wojciechowski R, Cheng CY, Khaw PT, Pasquale LR, Haines JL

and 4 more — show all

Foster PJ, Wiggs JL, Hammond CJ, Hysi PG

UK Biobank Eye and Vision Consortium · NEIGHBORHOOD Consortium

Nature genetics · 2018 · PMID 29785010 · open access

Questions about rs57435966

What is rs57435966?

rs57435966 is a single position in the genome, in or near the TRAF3IP1 gene. Published research associates it with intraocular pressure. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs57435966 linked to?

On MyGeneLog this position is linked to Intraocular Pressure. The research behind each link, and its sources, are set out on that condition page.

Does having rs57435966 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs57435966 come from?

GWAS Catalog, Nature genetics 2018, PMID:29785010. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Intraocular pressure (rs57435966). MyGeneLog™. https://www.mygenelog.com/variants/rs57435966

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