Sensitive

Crohns disease

NOD2 · rs5743292

Where this position leads

Condition: Celiac Disease

rs5743292 Condition: Celiac Disease Celiac Disease Condition rs5743292 rs5743292 NOD2

What the study found

Who was studied 394,626 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.612 higher (95% confidence interval 0.44-0.78); p = 2 × 10−12.

How common The A allele had a frequency of about 4% in the people studied.

Where it sits Chromosome 16, band 16q12.1 — in an intron of NOD2.

What each result means

A/A Two copies of the version the research linked to Crohns disease. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/T One copy of the version the research linked to Crohns disease. That is a smaller link than two copies.
T/T No copy of the version the research linked to Crohns disease. This is the starting point the study compared everyone against.
Source

Questions about rs5743292

What is rs5743292?

rs5743292 is a single position in the genome, in or near the NOD2 gene. Published research associates it with crohns disease. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs5743292 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs5743292 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs5743292 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Crohns disease (rs5743292). MyGeneLog™. https://www.mygenelog.com/variants/rs5743292

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