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PSCA protein levels

LY6E-DT · rs573257171

Where this position leads

Condition: Celiac Disease

rs573257171 Condition: Celiac Disease Celiac Disease Condition rs573257171 rs573257171 LY6E-DT

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.245 higher (95% confidence interval 0.15-0.34); p = 3 × 10−12.

How common The G allele had a frequency of about 0% in the people studied.

Where it sits Chromosome 8, band 8q24.3 — in an intron of LY6E-DT.

What each result means

C/C No copy of the version the research linked to PSCA protein levels. This is the starting point the study compared everyone against.
C/G One copy of the version the research linked to PSCA protein levels. That is a smaller link than two copies.
G/G Two copies of the version the research linked to PSCA protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs573257171

What is rs573257171?

rs573257171 is a single position in the genome, in or near the LY6E-DT gene. Published research associates it with psca protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs573257171 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs573257171 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs573257171 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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PSCA protein levels (rs573257171). MyGeneLog™. https://www.mygenelog.com/variants/rs573257171

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