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Low molecular weight phosphotyrosine protein phosphatase levels

LINC01865 · rs56378003

What the study found

Who was studied 2,935 Qatari ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.285 higher (95% confidence interval 0.22-0.35); p = 3 × 10−20.

How common The G allele had a frequency of about 25% in the people studied.

Where it sits Chromosome 2, band 2p25.3 — in an intron of LINC01865.

What each result means

A/A Published research associates this genotype with typical/baseline likelihood of Low molecular weight phosphotyrosine protein phosphatase levels — no copies of the reported risk allele.
A/G Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Low molecular weight phosphotyrosine protein phosphatase levels.
G/G Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Low molecular weight phosphotyrosine protein phosphatase levels compared to the general population.
Source

Questions about rs56378003

What is rs56378003?

rs56378003 is a single position in the genome, in or near the LINC01865 gene. Published research associates it with low molecular weight phosphotyrosine protein phosphatase levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs56378003 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs56378003 come from?

GWAS Catalog, Human molecular genetics 2023, PMID:36168886. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Low molecular weight phosphotyrosine protein phosphatase levels (rs56378003). MyGeneLog™. https://www.mygenelog.com/variants/rs56378003

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