Sensitive

Nonrheumatic tricuspid valve disorders (PheCode 395.3)

TNFSF4 · rs561708165

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−13, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 421 African American or Afro-Caribbean cases, 119,723 African American or Afro-Caribbean controls, 1,694 European ancestry cases, 442,596 European ancestry controls.

The effect Each copy of the A allele shifted the measure 2 lower (95% confidence interval 1.95-2.06); p = 2 × 10−13.

How common The A allele had a frequency of about 100% in the people studied.

Where it sits Chromosome 1, band 1q25.1 — in an intron of TNFSF4.

What each result means

A/A Two copies of the version the research linked to Nonrheumatic tricuspid valve disorders (PheCode 395.3). That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Nonrheumatic tricuspid valve disorders (PheCode 395.3). That is a smaller link than two copies.
C/C No copy of the version the research linked to Nonrheumatic tricuspid valve disorders (PheCode 395.3). This is the starting point the study compared everyone against.
Source

Questions about rs561708165

What is rs561708165?

rs561708165 is a single position in the genome, in or near the TNFSF4 gene. Published research associates it with nonrheumatic tricuspid valve disorders (phecode 395.3). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs561708165 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs561708165 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Nonrheumatic tricuspid valve disorders (PheCode 395.3) (rs561708165). MyGeneLog™. https://www.mygenelog.com/variants/rs561708165

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