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Stands on its own.
Nothing else here links to this position yet — but the page above is the point: what the
research found, what each genotype means, and where it came from, in language you can
read. Links to conditions, drugs and the senses appear automatically if we write them.
What the study found
Who was studied 909 European ancestry individuals; replicated in 369 individuals.
The effect
Each copy of the A allele shifted the measure 0.1 higher (95% confidence interval 0.07-0.14); p = 3 × 10−8.
How common The A allele had a frequency of about 55% in the people studied.
Where it sits Chromosome 9, band 9p23 — in an intron of PTPRD.
What each result means
A/ATwo copies of the version the research linked to Neurofibrillary tangles. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/COne copy of the version the research linked to Neurofibrillary tangles. That is a smaller link than two copies.
C/CNo copy of the version the research linked to Neurofibrillary tangles. This is the starting point the study compared everyone against.
Molecular psychiatry · 2018 · PMID 28322283 · open access
Questions about rs560380
What is rs560380?
rs560380 is a single position in the genome, in or near the PTPRD gene. Published research associates it with neurofibrillary tangles. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
Does having rs560380 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs560380 come from?
GWAS Catalog, Molecular psychiatry 2018, PMID:28322283. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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