Standard

Alkaline phosphatase levels

NBPF3 · rs558462412

What the study found

Who was studied 38,000 South Asian ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.387 lower (95% confidence interval 0.34-0.43); p = 5 × 10−62.

Where it sits Chromosome 1, band 1p36.12 — in an intron of NBPF3.

What each result means

A/A Two copies of the version the research linked to Alkaline phosphatase levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Alkaline phosphatase levels. That is a smaller link than two copies.
G/G No copy of the version the research linked to Alkaline phosphatase levels. This is the starting point the study compared everyone against.
Source

Questions about rs558462412

What is rs558462412?

rs558462412 is a single position in the genome, in or near the NBPF3 gene. Published research associates it with alkaline phosphatase levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs558462412 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs558462412 come from?

GWAS Catalog, Nature communications 2024, PMID:39414775. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Alkaline phosphatase levels (rs558462412). MyGeneLog™. https://www.mygenelog.com/variants/rs558462412

← See all variants