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Eye color

HERC2 · rs556360317

Where this position leads

Condition: Eye Color and Pigmentation

rs556360317 Condition: Eye Color and Pigmentation Eye Color and Pigmentation Condition rs556360317 rs556360317 HERC2

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−9, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 4,987 Iberian ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.486 higher (95% confidence interval 0.33-0.65); p = 3 × 10−9.

How common The T allele had a frequency of about 2% in the people studied.

Where it sits Chromosome 15, band 15q13.1 — in an intron of HERC2.

What each result means

A/A No copy of the version the research linked to Eye color. This is the starting point the study compared everyone against.
A/T One copy of the version the research linked to Eye color. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Eye color. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs556360317

What is rs556360317?

rs556360317 is a single position in the genome, in or near the HERC2 gene. Published research associates it with eye color. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs556360317 linked to?

On MyGeneLog this position is linked to Eye Color and Pigmentation. The research behind each link, and its sources, are set out on that condition page.

Does having rs556360317 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs556360317 come from?

GWAS Catalog, Genes 2023, PMID:36672889. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Eye color (rs556360317). MyGeneLog™. https://www.mygenelog.com/variants/rs556360317

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