Standard

Rosacea (PheCode 695.3)

near HLA-DRB1 · rs548090778

Where this position leads

Condition: Rosacea

rs548090778 Condition: Rosacea Rosacea Condition rs548090778 rs548090778 near HLA-DRB1

What the study found

Who was studied 410 African American or Afro-Caribbean cases, 121,119 African American or Afro-Caribbean controls, 14,815 European ancestry cases, 427,372 European ancestry controls, 1,070 Hispanic or Latin American cases, 58,225 Hispanic or Latin American controls.

The effect Each copy of the C allele shifted the measure 0.429 higher (95% confidence interval 0.32-0.54); p = 1 × 10−27.

How common The C allele had a frequency of about 91% in the people studied.

Where it sits Chromosome 6, band 6p21.32 — between genes, 13.9 kb from HLA-DRB1.

What each result means

A/A No copy of the version the research linked to Rosacea (PheCode 695.3). This is the starting point the study compared everyone against.
A/C One copy of the version the research linked to Rosacea (PheCode 695.3). That is a smaller link than two copies.
C/C Two copies of the version the research linked to Rosacea (PheCode 695.3). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs548090778

What is rs548090778?

rs548090778 is a single position in the genome, in or near the near HLA-DRB1 gene. Published research associates it with rosacea (phecode 695.3). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs548090778 linked to?

On MyGeneLog this position is linked to Rosacea. The research behind each link, and its sources, are set out on that condition page.

Does having rs548090778 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs548090778 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Rosacea (PheCode 695.3) (rs548090778). MyGeneLog™. https://www.mygenelog.com/variants/rs548090778

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