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Pernicious anemia (PheCode 281.11)

LINC02028 · rs537837866

Where this position leads

Condition: Pernicious Anemia

rs537837866 Condition: Pernicious Anemia Pernicious Anemia Condition rs537837866 rs537837866 LINC02028

What the study found

Who was studied 211 African American or Afro-Caribbean cases, 121,521 African American or Afro-Caribbean controls, 1,218 European ancestry cases, 449,047 European ancestry controls.

The effect Each copy of the T allele shifted the measure 4.37 lower (95% confidence interval 4.36-4.38); p = 1 × 10−11.

How common The T allele had a frequency of about 100% in the people studied.

Where it sits Chromosome 3, band 3q29 — in an intron of LINC02028.

What each result means

C/C No copy of the version the research linked to Pernicious anemia (PheCode 281.11). This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Pernicious anemia (PheCode 281.11). That is a smaller link than two copies.
T/T Two copies of the version the research linked to Pernicious anemia (PheCode 281.11). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs537837866

What is rs537837866?

rs537837866 is a single position in the genome, in or near the LINC02028 gene. Published research associates it with pernicious anemia (phecode 281.11). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs537837866 linked to?

On MyGeneLog this position is linked to Pernicious Anemia. The research behind each link, and its sources, are set out on that condition page.

Does having rs537837866 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs537837866 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Pernicious anemia (PheCode 281.11) (rs537837866). MyGeneLog™. https://www.mygenelog.com/variants/rs537837866

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