Standard

CA6 protein levels

near SLC45A1 · rs529843638

Where this position leads

Condition: Celiac Disease

rs529843638 Condition: Celiac Disease Celiac Disease Condition rs529843638 rs529843638 near SLC45A1

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.267 lower (95% confidence interval 0.19-0.35); p = 6 × 10−13.

How common The A allele had a frequency of about 1% in the people studied.

Where it sits Chromosome 1, band 1p36.23 — between genes, 4.3 kb from SLC45A1.

What each result means

A/A Two copies of the version the research linked to CA6 protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to CA6 protein levels. That is a smaller link than two copies.
G/G No copy of the version the research linked to CA6 protein levels. This is the starting point the study compared everyone against.
Source

Questions about rs529843638

What is rs529843638?

rs529843638 is a single position in the genome, in or near the near SLC45A1 gene. Published research associates it with ca6 protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs529843638 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs529843638 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs529843638 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

CA6 protein levels (rs529843638). MyGeneLog™. https://www.mygenelog.com/variants/rs529843638

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