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Standard

Phospholipids to Total Lipids in Very Small VLDL percentage

near ZNF652 · rs4794035

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 3 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the T allele shifted the measure 0.01 % lower (95% confidence interval 0.01-0.01); p = 3 × 10−12.

Where it sits Chromosome 17, band 17q21.32 — in an intron of FLJ40194.

How common each version is

CT
Korean KRGDB
C 45.4% · T 54.6%
Korean Korea4K
C 46.0% · T 54.0%
Korean Korea1K
C 45.3% · T 54.7%
Japanese ToMMo
C 42.9% · T 57.1%
World gnomAD
C 43.9% · T 56.1%
World 1000 Genomes
C 38.9% · T 61.1%
World TOPMed
C 43.4% · T 56.6%

By ancestry gnomAD

East Asian
C 46.9% · T 53.1%
European (non-Finnish)
C 47.4% · T 52.6%
African / African American
C 42.3% · T 57.7%
South Asian
C 25.3% · T 74.7%
Admixed American (Latino)
C 36.0% · T 64.0%
Middle Eastern
C 38.8% · T 61.2%
Finnish
C 47.9% · T 52.1%
Ashkenazi Jewish
C 36.5% · T 63.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. The ancestry rows are gnomAD's own groups (via Ensembl), as the survey defines them, not races.

What each result means

C/C No copy of the version the research linked to Phospholipids to Total Lipids in Very Small VLDL percentage. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Phospholipids to Total Lipids in Very Small VLDL percentage. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Phospholipids to Total Lipids in Very Small VLDL percentage. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Quoting this page

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Phospholipids to Total Lipids in Very Small VLDL percentage (rs4794035). MyGeneLog™. https://www.mygenelog.com/variants/rs4794035

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