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Lipoprotein A levels (UKB data field 30790)

near SOD2 · rs4709354

Where this position leads

Condition: Celiac Disease

rs4709354 Condition: Celiac Disease Celiac Disease Condition rs4709354 rs4709354 near SOD2

What the study found

Who was studied 394,642 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.024 higher (95% confidence interval 0.017-0.031); p = 5 × 10−13.

How common The G allele had a frequency of about 13% in the people studied.

Where it sits Chromosome 6, band 6q25.3 — between genes, 68.3 kb from SOD2.

What each result means

G/G Two copies of the version the research linked to Lipoprotein A levels (UKB data field 30790). That is the strongest link of the three results. A link in a study is not a diagnosis.
G/T One copy of the version the research linked to Lipoprotein A levels (UKB data field 30790). That is a smaller link than two copies.
T/T No copy of the version the research linked to Lipoprotein A levels (UKB data field 30790). This is the starting point the study compared everyone against.
Source

Questions about rs4709354

What is rs4709354?

rs4709354 is a single position in the genome, in or near the near SOD2 gene. Published research associates it with lipoprotein a levels (ukb data field 30790). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs4709354 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs4709354 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs4709354 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Lipoprotein A levels (UKB data field 30790) (rs4709354). MyGeneLog™. https://www.mygenelog.com/variants/rs4709354

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