Standard

TFPI2 protein levels

near COL1A2 · rs3763469

Where this position leads

Condition: Celiac Disease

rs3763469 Condition: Celiac Disease Celiac Disease Condition rs3763469 rs3763469 near COL1A2

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0675 higher (95% confidence interval 0.054-0.081); p = 2 × 10−25.

How common The C allele had a frequency of about 22% in the people studied.

Where it sits Chromosome 7, band 7q21.3 — between genes, 2.7 kb from COL1A2.

What each result means

C/C Two copies of the version the research linked to TFPI2 protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to TFPI2 protein levels. That is a smaller link than two copies.
T/T No copy of the version the research linked to TFPI2 protein levels. This is the starting point the study compared everyone against.
Source

Questions about rs3763469

What is rs3763469?

rs3763469 is a single position in the genome, in or near the near COL1A2 gene. Published research associates it with tfpi2 protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs3763469 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does having rs3763469 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs3763469 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

TFPI2 protein levels (rs3763469). MyGeneLog™. https://www.mygenelog.com/variants/rs3763469

← See all variants