Human papilloma virus 16 negative oropharyngeal cancer
ABTB3 · rs35189640
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Stands on its own.
Nothing else here links to this position yet — but the page above is the point: what the
research found, what each genotype means, and where it came from, in language you can
read. Links to conditions, drugs and the senses appear automatically if we write them.
What the study found
Who was studied 565 European ancestry cases, 5,256 European ancestry controls.
The effect
The reported allele is T; the catalogue records no effect size
; p = 1 × 10−9.
Where it sits Chromosome 12, band 12q23.3 — in an intron of ABTB3.
What each result means
C/CNo copy of the version the research linked to Human papilloma virus 16 negative oropharyngeal cancer. This is the starting point the study compared everyone against.
C/TOne copy of the version the research linked to Human papilloma virus 16 negative oropharyngeal cancer. That is a smaller link than two copies.
T/TTwo copies of the version the research linked to Human papilloma virus 16 negative oropharyngeal cancer. That is the strongest link of the three results. A link in a study is not a diagnosis.
Nature communications · 2021 · PMID 34642315 · open access
Questions about rs35189640
What is rs35189640?
rs35189640 is a single position in the genome, in or near the ABTB3 gene. Published research associates it with human papilloma virus 16 negative oropharyngeal cancer. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
Does having rs35189640 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs35189640 come from?
GWAS Catalog, Nature communications 2021, PMID:34642315. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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Human papilloma virus 16 negative oropharyngeal cancer (rs35189640). MyGeneLog™. https://www.mygenelog.com/variants/rs35189640