Standard

Serum levels of protein TPST1

ASL · rs313829

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−48, with 3 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 5,357 Icelandic ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.285 lower (95% confidence interval 0.25-0.32); p = 1 × 10−48.

How common The A allele had a frequency of about 32% in the people studied.

Where it sits Chromosome 7, band 7q11.21 — in an intron of ASL.

What ClinVar records

Classification Benign for Argininosuccinate lyase deficiency; criteria provided, multiple submitters, no conflicts (2 of 4 stars, 3 submitters), last evaluated 2021-07-01. ClinVar record 1177031 NM_000048.4(ASL):c.655+124A>G

Change history MyGeneLog™ keeps a copy of every weekly release from 2026-10-19 and compares them. This position's classification has not changed since.

What this is ClinVar's aggregate record for this position (as of its 2026-10-19 release), not a result about you. A classification describes the variant against the condition named, as laboratories submitted it. Whether a person carries this variant, and what that would mean for them, is a question for a clinical test and a genetic counsellor.

How common each version is

AG
Korean KRGDB
A 47.9% · G 52.1%
Korean Korea4K
A 48.8% · G 51.2%
Korean Korea1K
A 49.1% · G 50.9%
Japanese ToMMo
A 50.3% · G 49.7%
Vietnamese
A 59.4% · G 40.6%
World gnomAD
A 28.8% · G 71.2%
World 1000 Genomes
A 32.3% · G 67.7%
World TOPMed
A 27.7% · G 72.3%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Serum levels of protein TPST1. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Serum levels of protein TPST1. That is a smaller link than two copies.
G/G No copy of the version the research linked to Serum levels of protein TPST1. This is the starting point the study compared everyone against.
Source

Questions about rs313829

What is rs313829?

rs313829 is a single position in the genome, in or near the ASL gene. Published research associates it with serum levels of protein tpst1. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs313829 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs313829 come from?

GWAS Catalog, Nature communications 2022, PMID:35078996. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Serum levels of protein TPST1 (rs313829). MyGeneLog™. https://www.mygenelog.com/variants/rs313829

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