Standard

Phospholipid levels in medium HDL

POLR1HASP · rs3098023

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−13, with 6 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 115,082 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.043 higher (95% confidence interval 0.031-0.055); p = 3 × 10−13.

How common The A allele had a frequency of about 86% in the people studied.

Where it sits Chromosome 6, band 6p22.1 — inside POLR1HASP.

How common each version is

AT
World gnomAD
A 93.5% · T 6.5%
World 1000 Genomes
A 98.1% · T 1.9%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study. No Korean figure for this position yet.

What each result means

A/A Two copies of the version the research linked to Phospholipid levels in medium HDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/T One copy of the version the research linked to Phospholipid levels in medium HDL. That is a smaller link than two copies.
T/T No copy of the version the research linked to Phospholipid levels in medium HDL. This is the starting point the study compared everyone against.
Source

Questions about rs3098023

What is rs3098023?

rs3098023 is a single position in the genome, in or near the POLR1HASP gene. Published research associates it with phospholipid levels in medium hdl. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs3098023 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs3098023 come from?

GWAS Catalog, PLoS biology 2022, PMID:35213538. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Licensed CC BY-NC 4.0: free to read, share and adapt for non-commercial use, naming MyGeneLog™ and linking the exact page. Commercial use, including training or serving a commercial AI system, needs a licence — https://www.mygenelog.com/license

Phospholipid levels in medium HDL (rs3098023). MyGeneLog™. https://www.mygenelog.com/variants/rs3098023

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