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Cerebrospinal fluid protein HLA-A levels

near HLA-C · rs2853950

Strength of the evidence

2 / 4

Its strongest genetic-study result is p = 10−43, with 4 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 2,524 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.34 lower (95% confidence interval 0.29-0.39); p = 2 × 10−43.

How common The T allele had a frequency of about 45% in the people studied.

Where it sits Chromosome 6, band 6p21.33 — between genes, 0.4 kb from HLA-C.

What each result means

C/C No copy of the version the research linked to Cerebrospinal fluid protein HLA-A levels. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Cerebrospinal fluid protein HLA-A levels. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Cerebrospinal fluid protein HLA-A levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs2853950

What is rs2853950?

rs2853950 is a single position in the genome, in or near the near HLA-C gene. Published research associates it with cerebrospinal fluid protein hla-a levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs2853950 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2853950 come from?

GWAS Catalog, Science translational medicine 2026, PMID:42054495. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Cerebrospinal fluid protein HLA-A levels (rs2853950). MyGeneLog™. https://www.mygenelog.com/variants/rs2853950

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