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Mosaic loss of chromosome Y (Y chromosome dosage)

LINC01565 · rs2811487

Where this position leads

Condition: Mosaic Loss of Chromosome Y

rs2811487 Condition: Mosaic Loss of Chromosome Y Mosaic Loss of Chromosome Y Condition rs2811487 rs2811487 LINC01565

What the study found

Who was studied 205,011 men.

The effect Each copy of the G allele shifted the measure 0.01 higher (95% confidence interval -); p = 3 × 10−12.

How common The G allele had a frequency of about 77% in the people studied.

Where it sits Chromosome 3, band 3q21.3 — between genes, 6.9 kb from RPN1.

What each result means

A/A Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Mosaic loss of chromosome Y (Y chromosome dosage) compared to the general population.
A/G Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Mosaic loss of chromosome Y (Y chromosome dosage).
G/G Published research associates this genotype with typical/baseline likelihood of Mosaic loss of chromosome Y (Y chromosome dosage) — no copies of the reported risk allele.
Source

Questions about rs2811487

What is rs2811487?

rs2811487 is a single position in the genome, in or near the LINC01565 gene. Published research associates it with mosaic loss of chromosome y (y chromosome dosage). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2811487 linked to?

On MyGeneLog this position is linked to Mosaic Loss of Chromosome Y. The research behind each link, and its sources, are set out on that condition page.

Does having rs2811487 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2811487 come from?

GWAS Catalog, Nat Commun 2019, PMID:31624269. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

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