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Stands on its own.
Nothing else here links to this position yet — but the page above is the point: what the
research found, what each genotype means, and where it came from, in language you can
read. Links to conditions, drugs and the senses appear automatically if we write them.
Strength of the evidence
1 / 4
Its strongest genetic-study result is p = 10−13, with 2 associations in the GWAS Catalog.
How this is scored
4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.
What the study found
Who was studied 1,003 African American or Afro-Caribbean cases, 119,514 African American or Afro-Caribbean controls, 5,815 European ancestry cases, 438,251 European ancestry controls, 510 Hispanic or Latin American cases, 58,927 Hispanic or Latin American controls.
The effect
Each copy of the G allele shifted the measure 0.183 higher (95% confidence interval 0.13-0.24); p = 1 × 10−13.
How common The G allele had a frequency of about 83% in the people studied.
Where it sits Chromosome 17, band 17q21.31 — in an intron of KANSL1.
What each result means
A/ANo copy of the version the research linked to Postinflammatory pulmonary fibrosis (PheCode 502). This is the starting point the study compared everyone against.
A/GOne copy of the version the research linked to Postinflammatory pulmonary fibrosis (PheCode 502). That is a smaller link than two copies.
G/GTwo copies of the version the research linked to Postinflammatory pulmonary fibrosis (PheCode 502). That is the strongest link of the three results. A link in a study is not a diagnosis.
Science (New York, N.Y.) · 2024 · PMID 39024449 · open access
Questions about rs2532254
What is rs2532254?
rs2532254 is a single position in the genome, in or near the KANSL1 gene. Published research associates it with postinflammatory pulmonary fibrosis (phecode 502). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.
Does having rs2532254 mean I will get this?
No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.
Where does the information about rs2532254 come from?
GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.
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