Sensitive

Colorectal cancer

PLCB1 · rs2423279

Where this position leads

Condition: Colorectal Cancer

rs2423279 Condition: Colorectal Cancer Colorectal Cancer Condition rs2423279 rs2423279 PLCB1

What the study found

Who was studied 2,098 East Asian ancestry cases, 5,749 East Asian ancestry controls; replicated in 5,358 East Asian ancestry cases, 5,922 East Asian ancestry controls, 26,060 European ancestry individuals.

The effect Each copy of the C allele carried 1.14 times the odds of Colorectal cancer (95% confidence interval 1.08-1.19); p = 2 × 10−7.

How common The C allele had a frequency of about 30% in the people studied.

Where it sits Chromosome 20, band 20p12.3 — inside SRSF10P2.

What each result means

C/C Two copies of the version the research linked to Colorectal cancer. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Colorectal cancer. That is a smaller link than two copies.
T/T No copy of the version the research linked to Colorectal cancer. This is the starting point the study compared everyone against.
Source

What people read about alongside this

Papers in Europe PMC whose title or abstract names both this rsID and that subject. A shared paper means somebody wrote about the two together — it is not a claim that this position explains the subject.

Questions about rs2423279

What is rs2423279?

rs2423279 is a single position in the genome, in or near the PLCB1 gene. Published research associates it with colorectal cancer. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2423279 linked to?

On MyGeneLog this position is linked to Colorectal Cancer. The research behind each link, and its sources, are set out on that condition page.

What do people read about alongside rs2423279?

Subjects that appear in the title or abstract of the same papers as this rsID include alcohol and the flush (1 papers), blood sugar and insulin (1 papers). A shared paper means somebody wrote about the two together; it is not a claim that this position explains the topic.

Does having rs2423279 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2423279 come from?

GWAS Catalog, Nat Genet 2012, PMID:23263487. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Colorectal cancer (rs2423279). MyGeneLog™. https://www.mygenelog.com/variants/rs2423279

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