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Ulcerative colitis

PUS10 · rs2278300

Where this position leads

Condition: Ulcerative Colitis

rs2278300 Condition: Ulcerative Colitis Ulcerative Colitis Condition rs2278300 rs2278300 PUS10

What the study found

Who was studied 5,371 European ancestry cases, 412,561 European ancestry controls, 314 East Asian ancestry cases, 178,375 East Asian ancestry controls.

The effect Each copy of the G allele shifted the measure 0.125 higher (95% confidence interval 0.085-0.165); p = 1 × 10−9.

Where it sits Chromosome 2, band 2p16.1 — in an intron of PUS10.

What each result means

G/G Two copies of the version the research linked to Ulcerative colitis. That is the strongest link of the three results. A link in a study is not a diagnosis.
G/T One copy of the version the research linked to Ulcerative colitis. That is a smaller link than two copies.
T/T No copy of the version the research linked to Ulcerative colitis. This is the starting point the study compared everyone against.
Source

Questions about rs2278300

What is rs2278300?

rs2278300 is a single position in the genome, in or near the PUS10 gene. Published research associates it with ulcerative colitis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2278300 linked to?

On MyGeneLog this position is linked to Ulcerative Colitis. The research behind each link, and its sources, are set out on that condition page.

Does having rs2278300 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2278300 come from?

GWAS Catalog, Nature genetics 2021, PMID:34594039. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Ulcerative colitis (rs2278300). MyGeneLog™. https://www.mygenelog.com/variants/rs2278300

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