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Metabolite levels (phenylalanine)

PAH · rs2173442

What the study found

Who was studied 11,814 European, Hispanic or African American individuals; replicated in up to 2,466 African American individuals, up to 15,619 European ancestry individuals, 1,734 Hispanic ancestry children.

The effect Each copy of the A allele shifted the measure 0.092 lower (95% confidence interval 0.065-0.119); p = 2 × 10−11.

How common The A allele had a frequency of about 42% in the people studied.

Where it sits Chromosome 12, band 12q23.2 — inside PAH.

What each result means

A/A Two copies of the version the research linked to Metabolite levels (phenylalanine). That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Metabolite levels (phenylalanine). That is a smaller link than two copies.
G/G No copy of the version the research linked to Metabolite levels (phenylalanine). This is the starting point the study compared everyone against.
Source

Questions about rs2173442

What is rs2173442?

rs2173442 is a single position in the genome, in or near the PAH gene. Published research associates it with metabolite levels (phenylalanine). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs2173442 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2173442 come from?

GWAS Catalog, Nature communications 2023, PMID:37253714. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Metabolite levels (phenylalanine) (rs2173442). MyGeneLog™. https://www.mygenelog.com/variants/rs2173442

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