Standard

Sebaceous cyst (PheCode 706.2)

near RN7SL680P · rs2143217

What the study found

Who was studied 8,292 African American or Afro-Caribbean cases, 105,982 African American or Afro-Caribbean controls, 3,259 Hispanic or Latin American cases, 53,474 Hispanic or Latin American controls, 255 East Asian ancestry cases, 6,351 East Asian ancestry controls, 33,269 European ancestry cases, 387,301 European ancestry controls.

The effect Each copy of the C allele shifted the measure 0.0588 higher (95% confidence interval 0.042-0.076); p = 1 × 10−12.

How common The C allele had a frequency of about 39% in the people studied.

Where it sits Chromosome 20, band 20q12 — between genes, 97.4 kb from RN7SL680P.

What each result means

C/C Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Sebaceous cyst (PheCode 706.2) compared to the general population.
C/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Sebaceous cyst (PheCode 706.2).
T/T Published research associates this genotype with typical/baseline likelihood of Sebaceous cyst (PheCode 706.2) — no copies of the reported risk allele.
Source

Questions about rs2143217

What is rs2143217?

rs2143217 is a single position in the genome, in or near the near RN7SL680P gene. Published research associates it with sebaceous cyst (phecode 706.2). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs2143217 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2143217 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Sebaceous cyst (PheCode 706.2) (rs2143217). MyGeneLog™. https://www.mygenelog.com/variants/rs2143217

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