Sensitive

Multiple sclerosis

HLA-DQB1 · rs2040406

Where this position leads

Condition: Multiple Sclerosis

rs2040406 Condition: Multiple Sclerosis Multiple Sclerosis Condition rs2040406 rs2040406 HLA-DQB1

What the study found

Who was studied 882 Sardinian cases, 872 Sardinian controls; replicated in 1,775 Sardinian cases, 2,005 Sardinian controls.

The effect Each copy of the G allele carried 2.05 times the odds of Multiple sclerosis; p = 1 × 10−20.

How common The G allele had a frequency of about 26% in the people studied.

Where it sits Chromosome 6, band 6p21.32 — inside HLA-DQA1.

What each result means

A/A No copy of the version the research linked to Multiple sclerosis. This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Multiple sclerosis. That is a smaller link than two copies.
G/G Two copies of the version the research linked to Multiple sclerosis. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs2040406

What is rs2040406?

rs2040406 is a single position in the genome, in or near the HLA-DQB1 gene. Published research associates it with multiple sclerosis. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2040406 linked to?

On MyGeneLog this position is linked to Multiple Sclerosis. The research behind each link, and its sources, are set out on that condition page.

Does having rs2040406 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2040406 come from?

GWAS Catalog, Nat Genet 2010, PMID:20453840. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Multiple sclerosis (rs2040406). MyGeneLog™. https://www.mygenelog.com/variants/rs2040406

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