Sensitive

Depression

LRFN5 · rs1950829

Where this position leads

Condition: Endometriosis and Depression: Shared Genetics

rs1950829 Condition: Endometriosis and Depression: Shared Genetics Endometriosis and Depression: Share… Condition rs1950829 rs1950829 LRFN5

What the study found

Who was studied 15,771 East Asian ancestry cases, 178,777 East Asian ancestry controls, 170,756 European ancestry cases, 329,443 European ancestry controls.

The effect Each copy of the A allele shifted the measure 0.00947 higher (95% confidence interval 0.0066-0.0123); p = 8 × 10−11.

How common The A allele had a frequency of about 62% in the people studied.

Where it sits Chromosome 14, band 14q21.1 — in an intron of LRFN5.

What each result means

A/A Two copies of the version the research linked to Depression. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Depression. That is a smaller link than two copies.
G/G No copy of the version the research linked to Depression. This is the starting point the study compared everyone against.
Source

Questions about rs1950829

What is rs1950829?

rs1950829 is a single position in the genome, in or near the LRFN5 gene. Published research associates it with depression. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs1950829 linked to?

On MyGeneLog this position is linked to Endometriosis and Depression: Shared Genetics. The research behind each link, and its sources, are set out on that condition page.

Does having rs1950829 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs1950829 come from?

GWAS Catalog, JAMA psychiatry 2021, PMID:34586374. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Depression (rs1950829). MyGeneLog™. https://www.mygenelog.com/variants/rs1950829

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